Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AC023908.3-201ENST00000564211 3047 ntBASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 GAPDHP40-201ENST00000505218 1006 ntBASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 SAMD11P1-201ENST00000571429 661 ntBASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 FGD5P1-202ENST00000614866 2498 ntBASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.77■□□□□ 0.12
CCDC33Q8N5R6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 LINC01101-201ENST00000622953 1884 ntBASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC33Q8N5R6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 WASH3P-207ENST00000560956 1394 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CICP14-201ENST00000629111 2732 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 AC007787.1-201ENST00000588095 1583 ntBASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC33Q8N5R6 SNX18-202ENST00000343017 3140 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms