Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC005829.1-201ENST00000570002 483 ntBASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AC016397.2-201ENST00000624848 1985 ntBASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUDCD3Q8IVD9 AL031595.1-201ENST00000623969 4709 ntBASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 AC107918.4-201ENST00000641966 3141 ntBASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NUDCD3Q8IVD9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RPL37AP1-201ENST00000412502 279 ntBASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUDCD3Q8IVD9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 SPDYE7P-202ENST00000420373 878 ntBASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AC000095.1-201ENST00000603208 874 ntBASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AL137783.1-201ENST00000623494 1896 ntBASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUDCD3Q8IVD9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms