Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AC090643.2-201ENST00000623442 2029 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AL031719.1-201ENST00000623365 2587 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AC138969.2-201ENST00000532739 9932 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 UNC93B6-202ENST00000528242 690 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 AL161645.1-201ENST00000622716 1255 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 FAM215A-202ENST00000632077 792 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 KRT18P67-201ENST00000432816 1264 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AC009947.1-201ENST00000444350 727 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 EEF1DP4-201ENST00000446006 880 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AF186996.4-201ENST00000467186 377 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 KRT18P35-201ENST00000510488 1269 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CYP4F24P-201ENST00000586049 1580 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 TRIM80P-201ENST00000455685 2848 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 NCLP1-201ENST00000445357 1963 ntBASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LYSMD2Q8IV50 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms