Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 AL353732.1-201ENST00000569618 1459 ntBASIC8.17□□□□□ -1.1
LCA10Q71F78 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC8.17□□□□□ -1.1
LCA10Q71F78 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC8.17□□□□□ -1.1
LCA10Q71F78 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 AP002761.4-201ENST00000565433 3361 ntBASIC8.17□□□□□ -1.1
LCA10Q71F78 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 AC022400.8-201ENST00000623453 3599 ntBASIC8.17□□□□□ -1.1
LCA10Q71F78 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC8.17□□□□□ -1.1
LCA10Q71F78 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
LCA10Q71F78 MTHFR-210ENST00000641407 2387 ntBASIC8.17□□□□□ -1.1
LCA10Q71F78 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LCA10Q71F78 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LCA10Q71F78 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 EMD-201ENST00000369835 966 ntTSL 3 BASIC8.16□□□□□ -1.1
LCA10Q71F78 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 AC004945.1-201ENST00000416738 983 ntBASIC8.16□□□□□ -1.1
LCA10Q71F78 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 STARD13-205ENST00000439831 945 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC8.16□□□□□ -1.1
LCA10Q71F78 ARTN-206ENST00000472435 402 ntTSL 3 BASIC8.16□□□□□ -1.1
LCA10Q71F78 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 SLC25A6P2-201ENST00000497974 877 ntBASIC8.16□□□□□ -1.1
LCA10Q71F78 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LCA10Q71F78 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC8.16□□□□□ -1.1
LCA10Q71F78 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LCA10Q71F78 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 AC087641.1-201ENST00000557561 1021 ntBASIC8.16□□□□□ -1.1
LCA10Q71F78 RNF151-202ENST00000569210 853 ntTSL 2 BASIC8.16□□□□□ -1.1
LCA10Q71F78 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms