Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC008735.3-201ENST00000596646 500 ntBASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 AC233724.13-201ENST00000598383 410 ntBASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 IGHV3-72-202ENST00000621503 303 ntBASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNE3Q6ZMZ3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 AL009178.2-201ENST00000597278 2719 ntBASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 BCRP2-202ENST00000447763 634 ntBASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 BCRP6-201ENST00000510112 632 ntBASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 BCRP7-201ENST00000511549 544 ntBASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 AC023090.2-201ENST00000625182 2110 ntBASIC17.68■□□□□ 0.42
SYNE3Q6ZMZ3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AC232323.1-201ENST00000540724 2099 ntBASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 C2orf27AP3-201ENST00000434123 579 ntBASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AL354718.3-201ENST00000616414 581 ntBASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 CR382287.1-201ENST00000623954 586 ntBASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNE3Q6ZMZ3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms