Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KRT8P1-201ENST00000557533 1207 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 RN7SL665P-201ENST00000578793 300 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 AP006248.1-201ENST00000610471 67 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NOC2LP2-201ENST00000407594 1944 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC003102.2-201ENST00000589195 1469 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PPP1R2P4-201ENST00000424051 595 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC006328.1-201ENST00000437571 379 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 CDK4P1-201ENST00000454213 828 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC023968.2-201ENST00000560593 1049 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC015912.3-201ENST00000619432 348 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PGAM1P11-201ENST00000416729 680 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 EEF1DP5-201ENST00000431410 772 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 IGHEP2-201ENST00000519308 1256 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 AL118522.1-201ENST00000611368 560 ntBASIC12.71□□□□□ -0.37
LRRK2Q5S007 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LRRK2Q5S007 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
LRRK2Q5S007 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.71□□□□□ -0.38
LRRK2Q5S007 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LRRK2Q5S007 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LRRK2Q5S007 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LRRK2Q5S007 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.7□□□□□ -0.38
LRRK2Q5S007 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LRRK2Q5S007 SLC25A15P1-201ENST00000456738 342 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 TPT1P6-201ENST00000458298 514 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 SLC25A15P3-201ENST00000505530 290 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 AC078814.4-201ENST00000546650 327 ntBASIC12.7□□□□□ -0.38
LRRK2Q5S007 RN7SL121P-201ENST00000584223 273 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms