Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC132938.4-201ENST00000623835 848 ntBASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 FKBP4P6-201ENST00000457486 1332 ntBASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 AC092135.3-201ENST00000624151 1846 ntBASIC16.15■□□□□ 0.18
CBWD3Q5JTY5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CBWD3Q5JTY5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 FTLP10-202ENST00000505798 471 ntBASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 GCOM2-201ENST00000509133 1104 ntBASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 AC106820.3-201ENST00000561653 397 ntBASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 AL022328.1-201ENST00000610050 478 ntBASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.14■□□□□ 0.17
CBWD3Q5JTY5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 AL136172.1-201ENST00000598590 1394 ntBASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 LINC01230-201ENST00000625222 3017 ntBASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 AC005225.4-201ENST00000557330 545 ntBASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.13■□□□□ 0.17
CBWD3Q5JTY5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms