Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 GK-202ENST00000378941 458 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 CICP12-201ENST00000455801 843 ntBASIC19.37■□□□□ 0.69
CCDC27Q2M243 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 BX640514.1-201ENST00000583223 1918 ntBASIC19.37■□□□□ 0.69
CCDC27Q2M243 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.36■□□□□ 0.69
CCDC27Q2M243 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 YBX1P6-201ENST00000442962 1002 ntBASIC19.36■□□□□ 0.69
CCDC27Q2M243 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AC100850.1-201ENST00000506768 649 ntBASIC19.36■□□□□ 0.69
CCDC27Q2M243 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 AC009955.4-201ENST00000597192 544 ntBASIC19.36■□□□□ 0.69
CCDC27Q2M243 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC27Q2M243 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC27Q2M243 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 AC006504.5-208ENST00000588784 2401 ntBASIC19.35■□□□□ 0.69
CCDC27Q2M243 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 AC079178.1-201ENST00000420915 656 ntBASIC19.35■□□□□ 0.69
CCDC27Q2M243 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 EEF1DP1-201ENST00000585891 896 ntBASIC19.35■□□□□ 0.69
CCDC27Q2M243 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 AC015688.4-201ENST00000580780 1647 ntBASIC19.35■□□□□ 0.69
CCDC27Q2M243 AC097359.2-201ENST00000604992 2389 ntBASIC19.35■□□□□ 0.69
CCDC27Q2M243 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms