Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CALD1Q05682 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.45■□□□□ 0.7
CALD1Q05682 AP006547.1-201ENST00000563435 692 ntBASIC19.45■□□□□ 0.7
CALD1Q05682 EEF1DP1-201ENST00000585891 896 ntBASIC19.45■□□□□ 0.7
CALD1Q05682 AC008825.2-201ENST00000603374 718 ntBASIC19.45■□□□□ 0.7
CALD1Q05682 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.45■□□□□ 0.7
CALD1Q05682 KRT8P4-201ENST00000509735 1454 ntBASIC19.45■□□□□ 0.7
CALD1Q05682 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CALD1Q05682 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
CALD1Q05682 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CALD1Q05682 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CALD1Q05682 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALD1Q05682 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CALD1Q05682 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.44■□□□□ 0.7
CALD1Q05682 AC079178.1-201ENST00000420915 656 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 AC244107.1-201ENST00000442033 332 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.44■□□□□ 0.7
CALD1Q05682 AL583810.1-201ENST00000553344 1045 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.44■□□□□ 0.7
CALD1Q05682 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 TUBB1P2-201ENST00000422712 1306 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 TUBB1P1-201ENST00000503144 1300 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 CICP23-201ENST00000605013 2741 ntBASIC19.44■□□□□ 0.7
CALD1Q05682 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CALD1Q05682 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CALD1Q05682 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALD1Q05682 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.43■□□□□ 0.7
CALD1Q05682 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.43■□□□□ 0.7
CALD1Q05682 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.43■□□□□ 0.7
CALD1Q05682 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALD1Q05682 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.43■□□□□ 0.7
CALD1Q05682 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.43■□□□□ 0.7
CALD1Q05682 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms