Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 AC087386.2-201ENST00000623212 4637 ntBASIC13.88□□□□□ -0.19
PRKCDQ05655 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCDQ05655 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCDQ05655 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PRKCDQ05655 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.87□□□□□ -0.19
PRKCDQ05655 AL158212.4-201ENST00000624062 1286 ntBASIC13.87□□□□□ -0.19
PRKCDQ05655 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.87□□□□□ -0.19
PRKCDQ05655 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.87□□□□□ -0.19
PRKCDQ05655 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRKCDQ05655 BTBD7P1-201ENST00000447253 1453 ntBASIC13.87□□□□□ -0.19
PRKCDQ05655 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 AP001267.2-201ENST00000532619 2086 ntBASIC13.86□□□□□ -0.19
PRKCDQ05655 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 TREML5P-201ENST00000421694 576 ntBASIC13.86□□□□□ -0.19
PRKCDQ05655 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
PRKCDQ05655 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.86□□□□□ -0.19
PRKCDQ05655 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
PRKCDQ05655 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.86□□□□□ -0.19
PRKCDQ05655 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 AL391069.4-201ENST00000609583 481 ntBASIC13.86□□□□□ -0.19
PRKCDQ05655 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PRKCDQ05655 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PRKCDQ05655 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRKCDQ05655 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms