Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 AL138799.1-201ENST00000448213 1675 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NKX6-1P78426 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 GRK6P1-201ENST00000400595 1711 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 AC026748.1-201ENST00000624349 3251 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 CALR4P-201ENST00000431943 946 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 IGHJ2P-201ENST00000454480 60 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 AC106760.1-201ENST00000508690 800 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX6-1P78426 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 AC106872.11-201ENST00000605838 421 ntBASIC13.3□□□□□ -0.28
NKX6-1P78426 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX6-1P78426 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX6-1P78426 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX6-1P78426 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 AC020658.6-201ENST00000623564 1870 ntBASIC13.29□□□□□ -0.28
NKX6-1P78426 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX6-1P78426 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
NKX6-1P78426 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX6-1P78426 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms