Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL391280.1-201ENST00000506969 1062 ntBASIC14.17□□□□□ -0.14
RAE1P78406 AP001889.1-201ENST00000525414 633 ntBASIC14.17□□□□□ -0.14
RAE1P78406 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.17□□□□□ -0.14
RAE1P78406 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAE1P78406 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RAE1P78406 AC041040.2-201ENST00000622926 2899 ntBASIC14.17□□□□□ -0.14
RAE1P78406 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 RN7SL48P-201ENST00000579283 293 ntBASIC14.16□□□□□ -0.14
RAE1P78406 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 AP001002.3-201ENST00000623482 206 ntBASIC14.16□□□□□ -0.14
RAE1P78406 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RAE1P78406 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 PCDHA3-202ENST00000532566 4594 ntBASIC14.16□□□□□ -0.14
RAE1P78406 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAE1P78406 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAE1P78406 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAE1P78406 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 AC090505.1-201ENST00000430515 1834 ntBASIC14.15□□□□□ -0.14
RAE1P78406 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAE1P78406 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.15□□□□□ -0.14
RAE1P78406 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.15□□□□□ -0.14
RAE1P78406 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.15□□□□□ -0.14
RAE1P78406 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.15□□□□□ -0.14
RAE1P78406 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms