Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 TSPY25P-201ENST00000429463 745 ntBASIC17.5■□□□□ 0.39
CNTNAP1P78357 HLA-DPA2-205ENST00000433582 733 ntBASIC17.5■□□□□ 0.39
CNTNAP1P78357 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 RPSAP15-201ENST00000448168 861 ntBASIC17.5■□□□□ 0.39
CNTNAP1P78357 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 KRT8P31-201ENST00000504812 1408 ntBASIC17.5■□□□□ 0.39
CNTNAP1P78357 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP1P78357 AC018629.1-201ENST00000623381 1736 ntBASIC17.5■□□□□ 0.39
CNTNAP1P78357 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP1P78357 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 BANF1P3-201ENST00000412556 261 ntBASIC17.49■□□□□ 0.39
CNTNAP1P78357 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 XBP1P1-201ENST00000436573 652 ntBASIC17.49■□□□□ 0.39
CNTNAP1P78357 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 AL035414.1-201ENST00000451327 857 ntBASIC17.49■□□□□ 0.39
CNTNAP1P78357 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 ABHD17AP9-201ENST00000561925 548 ntBASIC17.49■□□□□ 0.39
CNTNAP1P78357 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP1P78357 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP1P78357 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 HLA-DMA-203ENST00000395305 777 ntBASIC17.48■□□□□ 0.39
CNTNAP1P78357 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP1P78357 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP1P78357 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms