Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDC42P60953 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 TCAF1P1-201ENST00000414990 2232 ntBASIC13.77□□□□□ -0.21
CDC42P60953 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.77□□□□□ -0.21
CDC42P60953 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDC42P60953 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDC42P60953 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.77□□□□□ -0.21
CDC42P60953 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 AC004066.1-201ENST00000502488 802 ntBASIC13.77□□□□□ -0.21
CDC42P60953 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.77□□□□□ -0.21
CDC42P60953 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.77□□□□□ -0.21
CDC42P60953 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 AC140113.2-201ENST00000604370 208 ntBASIC13.77□□□□□ -0.21
CDC42P60953 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDC42P60953 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42P60953 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.77□□□□□ -0.21
CDC42P60953 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.77□□□□□ -0.21
CDC42P60953 INE2-201ENST00000630399 1874 ntBASIC13.77□□□□□ -0.21
CDC42P60953 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42P60953 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDC42P60953 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.76□□□□□ -0.21
CDC42P60953 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.76□□□□□ -0.21
CDC42P60953 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDC42P60953 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 AC005237.2-201ENST00000434368 219 ntBASIC13.76□□□□□ -0.21
CDC42P60953 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.76□□□□□ -0.21
CDC42P60953 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDC42P60953 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42P60953 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42P60953 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDC42P60953 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
CDC42P60953 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42P60953 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms