Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNB3P54284 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.59■□□□□ 0.41
CACNB3P54284 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CACNB3P54284 AC103691.2-201ENST00000618824 433 ntBASIC17.59■□□□□ 0.41
CACNB3P54284 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 AL805961.1-201ENST00000642026 753 ntBASIC17.59■□□□□ 0.41
CACNB3P54284 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNB3P54284 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.59■□□□□ 0.41
CACNB3P54284 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNB3P54284 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNB3P54284 TMBIM7P-203ENST00000641617 1718 ntBASIC17.58■□□□□ 0.41
CACNB3P54284 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNB3P54284 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CACNB3P54284 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CACNB3P54284 TMBIM7P-202ENST00000641474 1516 ntBASIC17.58■□□□□ 0.41
CACNB3P54284 AC091951.1-201ENST00000512854 2465 ntBASIC17.58■□□□□ 0.41
CACNB3P54284 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNB3P54284 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CACNB3P54284 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
CACNB3P54284 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CACNB3P54284 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.58■□□□□ 0.4
CACNB3P54284 RN7SL181P-201ENST00000462921 277 ntBASIC17.58■□□□□ 0.4
CACNB3P54284 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.58■□□□□ 0.4
CACNB3P54284 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.58■□□□□ 0.4
CACNB3P54284 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 AC026803.1-201ENST00000569130 274 ntBASIC17.58■□□□□ 0.4
CACNB3P54284 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CACNB3P54284 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.58■□□□□ 0.4
CACNB3P54284 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CACNB3P54284 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CACNB3P54284 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNB3P54284 AL627231.1-201ENST00000394467 1125 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 AC026316.1-201ENST00000398900 414 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 RN7SL67P-201ENST00000492147 296 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 POU5F1P2-201ENST00000521750 823 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.57■□□□□ 0.4
CACNB3P54284 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 AC092299.1-201ENST00000632679 757 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.57■□□□□ 0.4
CACNB3P54284 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.57■□□□□ 0.4
CACNB3P54284 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CACNB3P54284 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CACNB3P54284 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms