Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 AL122018.1-201ENST00000446607 2310 ntBASIC14.35□□□□□ -0.11
PRIM2P49643 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.35□□□□□ -0.11
PRIM2P49643 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PRIM2P49643 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRIM2P49643 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
PRIM2P49643 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.34□□□□□ -0.11
PRIM2P49643 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 RPL13AP25-201ENST00000484130 612 ntBASIC14.34□□□□□ -0.11
PRIM2P49643 INGX-202ENST00000489074 768 ntBASIC14.34□□□□□ -0.11
PRIM2P49643 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 AC113367.3-201ENST00000508316 1912 ntBASIC14.34□□□□□ -0.11
PRIM2P49643 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.34□□□□□ -0.11
PRIM2P49643 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRIM2P49643 LILRP1-201ENST00000444199 1370 ntBASIC14.34□□□□□ -0.11
PRIM2P49643 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRIM2P49643 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
PRIM2P49643 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PRIM2P49643 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PRIM2P49643 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRIM2P49643 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.33□□□□□ -0.12
PRIM2P49643 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PRIM2P49643 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 SPDYE19P-201ENST00000338590 713 ntBASIC14.33□□□□□ -0.12
PRIM2P49643 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.33□□□□□ -0.12
PRIM2P49643 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRIM2P49643 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PRIM2P49643 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRIM2P49643 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.33□□□□□ -0.12
PRIM2P49643 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.33□□□□□ -0.12
PRIM2P49643 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms