Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.72□□□□□ -0.21
CENPAP49450 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.72□□□□□ -0.21
CENPAP49450 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.72□□□□□ -0.21
CENPAP49450 LINC00552-201ENST00000625151 2579 ntBASIC13.72□□□□□ -0.21
CENPAP49450 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CENPAP49450 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CENPAP49450 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.71□□□□□ -0.21
CENPAP49450 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 AC097493.3-201ENST00000509725 367 ntBASIC13.71□□□□□ -0.21
CENPAP49450 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.71□□□□□ -0.21
CENPAP49450 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.71□□□□□ -0.21
CENPAP49450 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.71□□□□□ -0.21
CENPAP49450 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.71□□□□□ -0.21
CENPAP49450 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 POM121L4P-202ENST00000427789 1891 ntBASIC13.71□□□□□ -0.21
CENPAP49450 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CENPAP49450 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.71□□□□□ -0.22
CENPAP49450 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
CENPAP49450 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.71□□□□□ -0.22
CENPAP49450 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CENPAP49450 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
CENPAP49450 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CENPAP49450 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.71□□□□□ -0.22
CENPAP49450 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.71□□□□□ -0.22
CENPAP49450 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CENPAP49450 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 AC087499.5-201ENST00000452760 1342 ntBASIC13.7□□□□□ -0.22
CENPAP49450 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.7□□□□□ -0.22
CENPAP49450 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CENPAP49450 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 METTL21AP1-201ENST00000438852 635 ntBASIC13.7□□□□□ -0.22
CENPAP49450 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.7□□□□□ -0.22
CENPAP49450 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms