Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFX5P48382 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFX5P48382 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX5P48382 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX5P48382 AC125604.1-201ENST00000496255 707 ntBASIC18.16■□□□□ 0.5
RFX5P48382 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.16■□□□□ 0.5
RFX5P48382 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX5P48382 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.16■□□□□ 0.5
RFX5P48382 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.16■□□□□ 0.5
RFX5P48382 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
RFX5P48382 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
RFX5P48382 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX5P48382 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX5P48382 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX5P48382 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX5P48382 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RFX5P48382 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ACTG1P2-201ENST00000415776 1125 ntBASIC18.15■□□□□ 0.5
RFX5P48382 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.15■□□□□ 0.5
RFX5P48382 ACTG1P11-201ENST00000425411 1125 ntBASIC18.15■□□□□ 0.5
RFX5P48382 MYADML-201ENST00000474610 2147 ntBASIC18.15■□□□□ 0.5
RFX5P48382 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 AC003686.1-201ENST00000550956 1034 ntBASIC18.15■□□□□ 0.5
RFX5P48382 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.15■□□□□ 0.5
RFX5P48382 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.15■□□□□ 0.5
RFX5P48382 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 NDUFV2P1-201ENST00000596415 907 ntBASIC18.15■□□□□ 0.5
RFX5P48382 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RFX5P48382 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX5P48382 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFX5P48382 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX5P48382 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.14■□□□□ 0.5
RFX5P48382 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.14■□□□□ 0.5
RFX5P48382 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX5P48382 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFX5P48382 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RFX5P48382 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RFX5P48382 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.14■□□□□ 0.49
RFX5P48382 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFX5P48382 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFX5P48382 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFX5P48382 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.14■□□□□ 0.49
RFX5P48382 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.14■□□□□ 0.49
RFX5P48382 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFX5P48382 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFX5P48382 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms