Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.78□□□□□ -0.2
RFC3P40938 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.78□□□□□ -0.2
RFC3P40938 AL391280.1-201ENST00000506969 1062 ntBASIC13.78□□□□□ -0.2
RFC3P40938 COX5BP1-201ENST00000507622 393 ntBASIC13.78□□□□□ -0.2
RFC3P40938 C2orf69P2-201ENST00000562032 1123 ntBASIC13.78□□□□□ -0.2
RFC3P40938 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.78□□□□□ -0.2
RFC3P40938 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 EEF1DP1-201ENST00000585891 896 ntBASIC13.78□□□□□ -0.2
RFC3P40938 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.78□□□□□ -0.2
RFC3P40938 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 AC005695.3-201ENST00000614522 232 ntBASIC13.78□□□□□ -0.2
RFC3P40938 AL645728.2-202ENST00000641679 227 ntBASIC13.78□□□□□ -0.2
RFC3P40938 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.78□□□□□ -0.2
RFC3P40938 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RFC3P40938 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RFC3P40938 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RFC3P40938 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 CD8B2-202ENST00000417670 633 ntBASIC13.77□□□□□ -0.21
RFC3P40938 POM121L8P-201ENST00000417732 1281 ntBASIC13.77□□□□□ -0.21
RFC3P40938 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 POM121L9P-203ENST00000441984 1285 ntBASIC13.77□□□□□ -0.21
RFC3P40938 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.77□□□□□ -0.21
RFC3P40938 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.77□□□□□ -0.21
RFC3P40938 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 RPSAP36-202ENST00000494591 1261 ntBASIC13.77□□□□□ -0.21
RFC3P40938 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 AC026434.2-201ENST00000506094 1078 ntBASIC13.77□□□□□ -0.21
RFC3P40938 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RFC3P40938 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 ZNF767P-206ENST00000513792 565 ntBASIC13.77□□□□□ -0.21
RFC3P40938 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 AC104982.3-201ENST00000581995 514 ntBASIC13.77□□□□□ -0.21
RFC3P40938 MIR3615-201ENST00000581999 87 ntBASIC13.77□□□□□ -0.21
RFC3P40938 PPY2P-201ENST00000582808 702 ntBASIC13.77□□□□□ -0.21
RFC3P40938 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RFC3P40938 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.77□□□□□ -0.21
RFC3P40938 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.77□□□□□ -0.21
RFC3P40938 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RFC3P40938 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RFC3P40938 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 AC005089.1-201ENST00000619486 2241 ntBASIC13.76□□□□□ -0.21
RFC3P40938 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.76□□□□□ -0.21
RFC3P40938 AL023775.1-201ENST00000454907 1746 ntBASIC13.76□□□□□ -0.21
RFC3P40938 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.76□□□□□ -0.21
RFC3P40938 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RFC3P40938 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RFC3P40938 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFC3P40938 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms