Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 SLC7A15P-201ENST00000424028 1363 ntBASIC14.34□□□□□ -0.11
GPC1P35052 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 AC087386.2-201ENST00000623212 4637 ntBASIC14.34□□□□□ -0.11
GPC1P35052 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
GPC1P35052 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
GPC1P35052 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GPC1P35052 LINC00552-201ENST00000625151 2579 ntBASIC14.33□□□□□ -0.11
GPC1P35052 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
GPC1P35052 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC1P35052 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GPC1P35052 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
GPC1P35052 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
GPC1P35052 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GPC1P35052 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GPC1P35052 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 AL353779.1-201ENST00000434793 351 ntBASIC14.33□□□□□ -0.12
GPC1P35052 UGT1A2P-201ENST00000454886 866 ntBASIC14.33□□□□□ -0.12
GPC1P35052 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 ADAM3B-201ENST00000569937 840 ntBASIC14.33□□□□□ -0.12
GPC1P35052 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.33□□□□□ -0.12
GPC1P35052 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 BX539320.1-201ENST00000623759 877 ntBASIC14.33□□□□□ -0.12
GPC1P35052 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.33□□□□□ -0.12
GPC1P35052 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.33□□□□□ -0.12
GPC1P35052 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
GPC1P35052 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
GPC1P35052 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 AL645937.2-201ENST00000396808 931 ntBASIC14.32□□□□□ -0.12
GPC1P35052 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
GPC1P35052 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 NUS1P3-201ENST00000423502 862 ntBASIC14.32□□□□□ -0.12
GPC1P35052 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
GPC1P35052 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.32□□□□□ -0.12
GPC1P35052 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.32□□□□□ -0.12
GPC1P35052 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.32□□□□□ -0.12
GPC1P35052 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.32□□□□□ -0.12
GPC1P35052 AC093726.1-201ENST00000608064 963 ntBASIC14.32□□□□□ -0.12
GPC1P35052 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.32□□□□□ -0.12
GPC1P35052 AJ011932.1-201ENST00000621707 465 ntBASIC14.32□□□□□ -0.12
GPC1P35052 AC007431.3-201ENST00000623221 587 ntBASIC14.32□□□□□ -0.12
GPC1P35052 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GPC1P35052 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GPC1P35052 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.32□□□□□ -0.12
GPC1P35052 AC093525.8-201ENST00000624099 1342 ntBASIC14.32□□□□□ -0.12
GPC1P35052 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms