Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 AC067750.1-201ENST00000608826 6545 ntBASIC13.59□□□□□ -0.23
GDF1P27539 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.59□□□□□ -0.23
GDF1P27539 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 AC004945.1-201ENST00000416738 983 ntBASIC13.59□□□□□ -0.23
GDF1P27539 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.59□□□□□ -0.23
GDF1P27539 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 HIST2H2BB-201ENST00000449108 381 ntBASIC13.59□□□□□ -0.23
GDF1P27539 RPSAP36-202ENST00000494591 1261 ntBASIC13.59□□□□□ -0.23
GDF1P27539 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.59□□□□□ -0.23
GDF1P27539 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.59□□□□□ -0.23
GDF1P27539 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.59□□□□□ -0.23
GDF1P27539 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 AC138696.2-201ENST00000607376 223 ntBASIC13.59□□□□□ -0.23
GDF1P27539 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 AC023090.2-201ENST00000625182 2110 ntBASIC13.59□□□□□ -0.23
GDF1P27539 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
GDF1P27539 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GDF1P27539 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.58□□□□□ -0.23
GDF1P27539 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
GDF1P27539 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GDF1P27539 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.58□□□□□ -0.24
GDF1P27539 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.58□□□□□ -0.24
GDF1P27539 RN7SKP175-201ENST00000408472 289 ntBASIC13.58□□□□□ -0.24
GDF1P27539 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 AC104306.2-201ENST00000451877 341 ntBASIC13.58□□□□□ -0.24
GDF1P27539 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.58□□□□□ -0.24
GDF1P27539 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.58□□□□□ -0.24
GDF1P27539 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.58□□□□□ -0.24
GDF1P27539 MIR4683-201ENST00000579659 81 ntBASIC13.58□□□□□ -0.24
GDF1P27539 AL118558.3-201ENST00000607414 1079 ntBASIC13.58□□□□□ -0.24
GDF1P27539 AC005695.3-201ENST00000614522 232 ntBASIC13.58□□□□□ -0.24
GDF1P27539 AC002472.3-201ENST00000640124 621 ntBASIC13.58□□□□□ -0.24
GDF1P27539 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
GDF1P27539 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
GDF1P27539 AC020910.5-201ENST00000623668 1865 ntBASIC13.58□□□□□ -0.24
GDF1P27539 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.58□□□□□ -0.24
GDF1P27539 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.58□□□□□ -0.24
GDF1P27539 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.24
GDF1P27539 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.58□□□□□ -0.24
GDF1P27539 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.58□□□□□ -0.24
GDF1P27539 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDF1P27539 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms