Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN3P26045 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN3P26045 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN3P26045 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN3P26045 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN3P26045 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 AC015802.1-201ENST00000588104 1449 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 RN7SKP230-201ENST00000365642 335 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.27■□□□□ 0.04
PTPN3P26045 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 INE1-201ENST00000456273 945 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 TPT1P11-201ENST00000458482 498 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 AC022447.6-201ENST00000515522 438 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN3P26045 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.27■□□□□ 0.04
PTPN3P26045 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN3P26045 GNRHR2-203ENST00000581100 1187 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 MIR3197-201ENST00000582241 73 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN3P26045 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PTPN3P26045 ENPP7P14-201ENST00000621765 1040 ntBASIC15.27■□□□□ 0.04
PTPN3P26045 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.27■□□□□ 0.03
PTPN3P26045 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTPN3P26045 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN3P26045 MESTP3-201ENST00000503460 968 ntBASIC15.26■□□□□ 0.03
PTPN3P26045 USP32P1-208ENST00000506594 1164 ntBASIC15.26■□□□□ 0.03
PTPN3P26045 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.26■□□□□ 0.03
PTPN3P26045 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 RN7SL48P-201ENST00000579283 293 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms