Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 TCAM1P-207ENST00000485295 1537 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 TIMM8BP1-201ENST00000452384 211 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 KRT18P56-201ENST00000507275 550 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 RNA5SP416-201ENST00000516838 111 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
RAB3BP20337 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 RN7SL510P-201ENST00000581311 263 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RAB3BP20337 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAB3BP20337 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAB3BP20337 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 AC027612.1-201ENST00000445234 2395 ntBASIC13.2□□□□□ -0.3
RAB3BP20337 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB3BP20337 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB3BP20337 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 AL023775.1-201ENST00000454907 1746 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 AC015818.8-201ENST00000587907 1519 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.19□□□□□ -0.3
RAB3BP20337 AC015922.1-201ENST00000421102 1152 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.19□□□□□ -0.3
RAB3BP20337 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 AL662844.1-201ENST00000546340 181 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.19□□□□□ -0.3
RAB3BP20337 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 Z97205.2-201ENST00000564697 1639 ntBASIC13.19□□□□□ -0.3
RAB3BP20337 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAB3BP20337 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RAB3BP20337 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms