Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.98■□□□□ 0.47
NCLP19338 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.98■□□□□ 0.47
NCLP19338 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.98■□□□□ 0.47
NCLP19338 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.98■□□□□ 0.47
NCLP19338 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
NCLP19338 AC003101.2-201ENST00000612557 442 ntBASIC17.98■□□□□ 0.47
NCLP19338 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLP19338 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NCLP19338 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 HSPA7-201ENST00000445535 1927 ntBASIC17.98■□□□□ 0.47
NCLP19338 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NCLP19338 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLP19338 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NCLP19338 TP73-211ENST00000604074 4806 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 REXO1L2P-201ENST00000425429 2069 ntBASIC17.97■□□□□ 0.47
NCLP19338 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NCLP19338 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NCLP19338 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.97■□□□□ 0.47
NCLP19338 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.97■□□□□ 0.47
NCLP19338 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.97■□□□□ 0.47
NCLP19338 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.97■□□□□ 0.47
NCLP19338 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 AC093214.1-201ENST00000511688 1107 ntBASIC17.97■□□□□ 0.47
NCLP19338 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NCLP19338 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NCLP19338 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NCLP19338 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLP19338 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NCLP19338 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NCLP19338 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 AC113367.3-201ENST00000508316 1912 ntBASIC17.96■□□□□ 0.47
NCLP19338 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCLP19338 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NCLP19338 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms