Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MS4A1P11836 AC098850.1-201ENST00000419919 790 ntBASIC19.28■□□□□ 0.68
MS4A1P11836 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.28■□□□□ 0.68
MS4A1P11836 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MS4A1P11836 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.28■□□□□ 0.68
MS4A1P11836 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.28■□□□□ 0.68
MS4A1P11836 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.28■□□□□ 0.68
MS4A1P11836 CHCHD2P3-201ENST00000603038 451 ntBASIC19.28■□□□□ 0.68
MS4A1P11836 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MS4A1P11836 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.28■□□□□ 0.68
MS4A1P11836 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.28■□□□□ 0.68
MS4A1P11836 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MS4A1P11836 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A1P11836 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A1P11836 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MS4A1P11836 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A1P11836 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.27■□□□□ 0.68
MS4A1P11836 RNU1-114P-201ENST00000365297 166 ntBASIC19.27■□□□□ 0.68
MS4A1P11836 KLF2P2-201ENST00000416807 1039 ntBASIC19.27■□□□□ 0.68
MS4A1P11836 AL162726.2-201ENST00000438986 1017 ntBASIC19.27■□□□□ 0.68
MS4A1P11836 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A1P11836 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.27■□□□□ 0.68
MS4A1P11836 API5-211ENST00000534695 560 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A1P11836 SPCS2P1-201ENST00000561636 679 ntBASIC19.27■□□□□ 0.68
MS4A1P11836 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.27■□□□□ 0.68
MS4A1P11836 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.27■□□□□ 0.68
MS4A1P11836 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.27■□□□□ 0.68
MS4A1P11836 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A1P11836 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A1P11836 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
MS4A1P11836 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
MS4A1P11836 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC19.27■□□□□ 0.67
MS4A1P11836 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MS4A1P11836 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
MS4A1P11836 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
MS4A1P11836 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC19.27■□□□□ 0.67
MS4A1P11836 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MS4A1P11836 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
MS4A1P11836 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
MS4A1P11836 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC19.27■□□□□ 0.67
MS4A1P11836 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC19.27■□□□□ 0.67
MS4A1P11836 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MS4A1P11836 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MS4A1P11836 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 PIN1P1-201ENST00000412108 996 ntBASIC19.26■□□□□ 0.67
MS4A1P11836 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 BCRP1-201ENST00000444246 691 ntBASIC19.26■□□□□ 0.67
MS4A1P11836 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 AP001063.1-201ENST00000568332 529 ntBASIC19.26■□□□□ 0.67
MS4A1P11836 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.26■□□□□ 0.67
MS4A1P11836 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A1P11836 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A1P11836 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A1P11836 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms