Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AL354702.1-201ENST00000442006 1960 ntBASIC16.88■□□□□ 0.29
TPM3P06753 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TPM3P06753 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 KRT18P32-201ENST00000424695 1287 ntBASIC16.87■□□□□ 0.29
TPM3P06753 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 SERBP1P3-201ENST00000459980 809 ntBASIC16.87■□□□□ 0.29
TPM3P06753 KRT18P43-201ENST00000469825 1281 ntBASIC16.87■□□□□ 0.29
TPM3P06753 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.87■□□□□ 0.29
TPM3P06753 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 RN7SL828P-201ENST00000607615 303 ntBASIC16.87■□□□□ 0.29
TPM3P06753 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 LILRP1-201ENST00000444199 1370 ntBASIC16.87■□□□□ 0.29
TPM3P06753 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TPM3P06753 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.87■□□□□ 0.29
TPM3P06753 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TPM3P06753 AC090505.1-201ENST00000430515 1834 ntBASIC16.86■□□□□ 0.29
TPM3P06753 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.86■□□□□ 0.29
TPM3P06753 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TPM3P06753 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 Z97205.2-201ENST00000564697 1639 ntBASIC16.86■□□□□ 0.29
TPM3P06753 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 MTND6P24-201ENST00000440466 518 ntBASIC16.86■□□□□ 0.29
TPM3P06753 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.86■□□□□ 0.29
TPM3P06753 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TPM3P06753 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.86■□□□□ 0.29
TPM3P06753 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.86■□□□□ 0.29
TPM3P06753 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TPM3P06753 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms