Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
APOBP04114 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 SNORA57-201ENST00000383870 149 ntBASIC8.99□□□□□ -0.97
APOBP04114 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC8.99□□□□□ -0.97
APOBP04114 ERP29P1-201ENST00000442902 706 ntBASIC8.99□□□□□ -0.97
APOBP04114 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
APOBP04114 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 C18orf15-201ENST00000623680 2534 ntBASIC8.99□□□□□ -0.97
APOBP04114 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 FAM197Y6-201ENST00000420524 766 ntBASIC8.99□□□□□ -0.97
APOBP04114 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 TPT1P6-201ENST00000458298 514 ntBASIC8.99□□□□□ -0.97
APOBP04114 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC8.99□□□□□ -0.97
APOBP04114 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC8.99□□□□□ -0.97
APOBP04114 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 HNRNPA1P5-201ENST00000558213 966 ntBASIC8.99□□□□□ -0.97
APOBP04114 NT5C-204ENST00000578337 582 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 AC023024.2-201ENST00000623561 1993 ntBASIC8.99□□□□□ -0.97
APOBP04114 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
APOBP04114 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
APOBP04114 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC8.99□□□□□ -0.97
APOBP04114 AL132994.1-201ENST00000554098 400 ntBASIC8.99□□□□□ -0.97
APOBP04114 AC023968.2-201ENST00000560593 1049 ntBASIC8.99□□□□□ -0.97
APOBP04114 GAS7-216ENST00000583882 553 ntTSL 5 BASIC8.99□□□□□ -0.97
APOBP04114 AC005746.3-201ENST00000614751 393 ntBASIC8.99□□□□□ -0.97
APOBP04114 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC8.99□□□□□ -0.97
APOBP04114 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
APOBP04114 AP005117.1-202ENST00000581724 1908 ntBASIC8.99□□□□□ -0.97
APOBP04114 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 ODCP-201ENST00000459650 1639 ntBASIC8.99□□□□□ -0.97
APOBP04114 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 AL391005.1-201ENST00000623953 2435 ntBASIC8.99□□□□□ -0.97
APOBP04114 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
APOBP04114 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC8.98□□□□□ -0.97
APOBP04114 HLA-DMA-202ENST00000395303 1007 ntBASIC8.98□□□□□ -0.97
APOBP04114 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 AL035414.1-201ENST00000451327 857 ntBASIC8.98□□□□□ -0.97
APOBP04114 IGHEP2-201ENST00000519308 1256 ntBASIC8.98□□□□□ -0.97
APOBP04114 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AC087481.3-201ENST00000602886 1894 ntBASIC8.98□□□□□ -0.97
APOBP04114 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
APOBP04114 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 JPT2-203ENST00000382711 894 ntTSL 4 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms