Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 AL139094.1-201ENST00000405549 1188 ntBASIC14.59□□□□□ -0.07
KRT6AP02538 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
KRT6AP02538 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 AC005498.2-205ENST00000593218 784 ntBASIC14.59□□□□□ -0.07
KRT6AP02538 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.59□□□□□ -0.07
KRT6AP02538 AC006538.3-201ENST00000612495 578 ntBASIC14.59□□□□□ -0.07
KRT6AP02538 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.59□□□□□ -0.07
KRT6AP02538 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
KRT6AP02538 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.59□□□□□ -0.07
KRT6AP02538 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
KRT6AP02538 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
KRT6AP02538 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KRT6AP02538 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
KRT6AP02538 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.58□□□□□ -0.07
KRT6AP02538 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
KRT6AP02538 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT6AP02538 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
KRT6AP02538 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KRT6AP02538 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
KRT6AP02538 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6AP02538 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 C1QBPP1-201ENST00000400117 770 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 AL442647.2-201ENST00000429864 857 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 GNAQP1-201ENST00000444815 1067 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 RFPL4AP1-201ENST00000530883 850 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.58□□□□□ -0.08
KRT6AP02538 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 AC009118.2-201ENST00000613275 655 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6AP02538 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT6AP02538 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.58□□□□□ -0.08
KRT6AP02538 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 SLC7A15P-201ENST00000424028 1363 ntBASIC14.58□□□□□ -0.08
KRT6AP02538 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT6AP02538 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms