Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 AC009093.2-202ENST00000620513 2079 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RN7SKP175-201ENST00000408472 289 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 MIR1202-201ENST00000408529 83 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 MIR1909-201ENST00000411312 80 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 KLF2P4-201ENST00000451959 1225 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 AL354702.1-201ENST00000442006 1960 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HLA-DRAP01903 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 AL354989.2-201ENST00000435838 1540 ntBASIC16.09■□□□□ 0.17
HLA-DRAP01903 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HLA-DRAP01903 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DRAP01903 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HLA-DRAP01903 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.08■□□□□ 0.17
HLA-DRAP01903 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.08■□□□□ 0.17
HLA-DRAP01903 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 AC113367.3-201ENST00000508316 1912 ntBASIC16.08■□□□□ 0.16
HLA-DRAP01903 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 GPR53P-205ENST00000457298 1084 ntBASIC16.08■□□□□ 0.16
HLA-DRAP01903 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HLA-DRAP01903 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
HLA-DRAP01903 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HLA-DRAP01903 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DRAP01903 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DRAP01903 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HLA-DRAP01903 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
HLA-DRAP01903 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms