Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.02■□□□□ 0.32
SMC2O95347 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 AL645937.2-201ENST00000396808 931 ntBASIC17.02■□□□□ 0.32
SMC2O95347 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 AL353779.1-201ENST00000434793 351 ntBASIC17.02■□□□□ 0.32
SMC2O95347 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.02■□□□□ 0.32
SMC2O95347 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.02■□□□□ 0.32
SMC2O95347 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.02■□□□□ 0.32
SMC2O95347 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SMC2O95347 DRD5P1-201ENST00000456605 1438 ntBASIC17.02■□□□□ 0.31
SMC2O95347 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.02■□□□□ 0.31
SMC2O95347 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 AC018665.1-201ENST00000622927 1362 ntBASIC17.02■□□□□ 0.31
SMC2O95347 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMC2O95347 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.01■□□□□ 0.31
SMC2O95347 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMC2O95347 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.01■□□□□ 0.31
SMC2O95347 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.01■□□□□ 0.31
SMC2O95347 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.01■□□□□ 0.31
SMC2O95347 AL589987.1-201ENST00000453380 819 ntBASIC17.01■□□□□ 0.31
SMC2O95347 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.01■□□□□ 0.31
SMC2O95347 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.01■□□□□ 0.31
SMC2O95347 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
SMC2O95347 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.01■□□□□ 0.31
SMC2O95347 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.01■□□□□ 0.31
SMC2O95347 DUX4L27-201ENST00000554796 1261 ntBASIC17.01■□□□□ 0.31
SMC2O95347 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.01■□□□□ 0.31
SMC2O95347 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMC2O95347 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SMC2O95347 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.01■□□□□ 0.31
SMC2O95347 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMC2O95347 AL138799.1-201ENST00000448213 1675 ntBASIC17.01■□□□□ 0.31
SMC2O95347 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17■□□□□ 0.31
SMC2O95347 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17■□□□□ 0.31
SMC2O95347 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17■□□□□ 0.31
SMC2O95347 AL158070.2-201ENST00000623713 1621 ntBASIC17■□□□□ 0.31
SMC2O95347 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17■□□□□ 0.31
SMC2O95347 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17■□□□□ 0.31
SMC2O95347 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SMC2O95347 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SMC2O95347 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMC2O95347 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SMC2O95347 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17■□□□□ 0.31
SMC2O95347 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17■□□□□ 0.31
SMC2O95347 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17■□□□□ 0.31
SMC2O95347 FAM86LP-201ENST00000478302 853 ntBASIC17■□□□□ 0.31
SMC2O95347 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17■□□□□ 0.31
SMC2O95347 AC026410.3-201ENST00000514280 936 ntBASIC17■□□□□ 0.31
SMC2O95347 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17■□□□□ 0.31
SMC2O95347 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms