Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BEST1O76090 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST1O76090 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST1O76090 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BEST1O76090 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BEST1O76090 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.64■□□□□ 0.09
BEST1O76090 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST1O76090 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST1O76090 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST1O76090 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST1O76090 AC009955.4-201ENST00000597192 544 ntBASIC15.64■□□□□ 0.09
BEST1O76090 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST1O76090 GPR182-203ENST00000622922 591 ntBASIC15.64■□□□□ 0.09
BEST1O76090 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 AL596257.1-201ENST00000641463 2694 ntBASIC15.64■□□□□ 0.09
BEST1O76090 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST1O76090 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST1O76090 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 AL136172.1-201ENST00000598590 1394 ntBASIC15.63■□□□□ 0.09
BEST1O76090 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.63■□□□□ 0.09
BEST1O76090 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
BEST1O76090 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.63■□□□□ 0.09
BEST1O76090 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.63■□□□□ 0.09
BEST1O76090 PUDPP3-201ENST00000445368 636 ntBASIC15.63■□□□□ 0.09
BEST1O76090 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 CICP12-201ENST00000455801 843 ntBASIC15.63■□□□□ 0.09
BEST1O76090 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.63■□□□□ 0.09
BEST1O76090 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.63■□□□□ 0.09
BEST1O76090 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 MRPL37P1-201ENST00000592451 1337 ntBASIC15.63■□□□□ 0.09
BEST1O76090 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BEST1O76090 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BEST1O76090 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST1O76090 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms