Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LGR5O75473 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.56■□□□□ 0.24
LGR5O75473 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.56■□□□□ 0.24
LGR5O75473 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 PUDPP3-201ENST00000445368 636 ntBASIC16.56■□□□□ 0.24
LGR5O75473 CICP12-201ENST00000455801 843 ntBASIC16.56■□□□□ 0.24
LGR5O75473 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 RPL18P13-201ENST00000478088 569 ntBASIC16.56■□□□□ 0.24
LGR5O75473 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 MARK2P5-201ENST00000507649 634 ntBASIC16.56■□□□□ 0.24
LGR5O75473 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.56■□□□□ 0.24
LGR5O75473 Z98259.2-201ENST00000641583 609 ntBASIC16.56■□□□□ 0.24
LGR5O75473 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.56■□□□□ 0.24
LGR5O75473 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.56■□□□□ 0.24
LGR5O75473 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.56■□□□□ 0.24
LGR5O75473 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.56■□□□□ 0.24
LGR5O75473 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LGR5O75473 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
LGR5O75473 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 VDAC1P1-201ENST00000439229 848 ntBASIC16.55■□□□□ 0.24
LGR5O75473 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.55■□□□□ 0.24
LGR5O75473 AC012441.2-201ENST00000444843 739 ntBASIC16.55■□□□□ 0.24
LGR5O75473 MPRIPP1-201ENST00000452433 1089 ntBASIC16.55■□□□□ 0.24
LGR5O75473 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.55■□□□□ 0.24
LGR5O75473 MIR4722-201ENST00000578292 60 ntBASIC16.55■□□□□ 0.24
LGR5O75473 MIR4706-201ENST00000582134 82 ntBASIC16.55■□□□□ 0.24
LGR5O75473 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LGR5O75473 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.55■□□□□ 0.24
LGR5O75473 AC100757.4-201ENST00000626934 759 ntBASIC16.55■□□□□ 0.24
LGR5O75473 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 AC013268.4-201ENST00000637413 2228 ntBASIC16.55■□□□□ 0.24
LGR5O75473 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 AC006486.2-201ENST00000624246 2199 ntBASIC16.55■□□□□ 0.24
LGR5O75473 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.55■□□□□ 0.24
LGR5O75473 AC104581.4-201ENST00000623126 3052 ntBASIC16.55■□□□□ 0.24
LGR5O75473 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.55■□□□□ 0.24
LGR5O75473 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LGR5O75473 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.55■□□□□ 0.24
LGR5O75473 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.55■□□□□ 0.24
LGR5O75473 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LGR5O75473 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LGR5O75473 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 LINC01101-201ENST00000622953 1884 ntBASIC16.54■□□□□ 0.24
LGR5O75473 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 AL008718.2-201ENST00000609206 1313 ntBASIC16.54■□□□□ 0.24
LGR5O75473 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LGR5O75473 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms