Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 MRPL37P1-201ENST00000592451 1337 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 MIR663B-201ENST00000408361 115 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 SHC1P1-201ENST00000425230 1745 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.43□□□□□ -0.26
ZIC3O60481 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 PFN1P12-201ENST00000455938 534 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.43□□□□□ -0.26
ZIC3O60481 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.43□□□□□ -0.26
ZIC3O60481 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.43□□□□□ -0.26
ZIC3O60481 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.43□□□□□ -0.26
ZIC3O60481 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 AC104982.3-201ENST00000581995 514 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 RN7SL219P-201ENST00000582872 296 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 MIR6869-201ENST00000619434 62 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.43□□□□□ -0.26
ZIC3O60481 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.43□□□□□ -0.26
ZIC3O60481 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 AL596257.1-201ENST00000641463 2694 ntBASIC13.43□□□□□ -0.26
ZIC3O60481 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ZIC3O60481 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
ZIC3O60481 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.43□□□□□ -0.26
ZIC3O60481 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ZIC3O60481 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZIC3O60481 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ZIC3O60481 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.42□□□□□ -0.26
ZIC3O60481 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.42□□□□□ -0.26
ZIC3O60481 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 PUDPP3-201ENST00000445368 636 ntBASIC13.42□□□□□ -0.26
ZIC3O60481 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC3O60481 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.42□□□□□ -0.26
ZIC3O60481 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC3O60481 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.42□□□□□ -0.26
ZIC3O60481 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ZIC3O60481 FAM8A2P-201ENST00000528813 1142 ntBASIC13.42□□□□□ -0.26
ZIC3O60481 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.42□□□□□ -0.26
ZIC3O60481 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.42□□□□□ -0.26
ZIC3O60481 MIR4783-201ENST00000580343 82 ntBASIC13.42□□□□□ -0.26
ZIC3O60481 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.42□□□□□ -0.26
ZIC3O60481 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.42□□□□□ -0.26
ZIC3O60481 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ZIC3O60481 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ZIC3O60481 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ZIC3O60481 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms