Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC28A2O43868 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 AC104457.1-201ENST00000401024 814 ntBASIC14.54□□□□□ -0.08
SLC28A2O43868 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC28A2O43868 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 AL008638.5-201ENST00000623814 1298 ntBASIC14.54□□□□□ -0.08
SLC28A2O43868 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC28A2O43868 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.54□□□□□ -0.08
SLC28A2O43868 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC28A2O43868 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC28A2O43868 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 SLED1-202ENST00000512051 380 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ENPP7P5-201ENST00000541031 1031 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 AC023310.1-201ENST00000554836 735 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.53□□□□□ -0.08
SLC28A2O43868 AC008687.7-202ENST00000637404 953 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 CICP23-201ENST00000605013 2741 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SLC28A2O43868 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms