Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL031595.1-201ENST00000623969 4709 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLOCKO15516 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLOCKO15516 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 BASP1P1-201ENST00000430708 665 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 SPDYE14P-201ENST00000442619 822 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.35□□□□□ -0.11
CLOCKO15516 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.35□□□□□ -0.11
CLOCKO15516 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 AC084121.4-201ENST00000641598 221 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 AF228730.8-201ENST00000642140 221 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 AL356585.2-201ENST00000625078 2396 ntBASIC14.35□□□□□ -0.11
CLOCKO15516 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
CLOCKO15516 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.35□□□□□ -0.11
CLOCKO15516 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.35□□□□□ -0.11
CLOCKO15516 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLOCKO15516 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CLOCKO15516 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.34□□□□□ -0.11
CLOCKO15516 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.34□□□□□ -0.11
CLOCKO15516 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.34□□□□□ -0.11
CLOCKO15516 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.34□□□□□ -0.11
CLOCKO15516 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.34□□□□□ -0.11
CLOCKO15516 AC051619.7-201ENST00000568314 623 ntBASIC14.34□□□□□ -0.11
CLOCKO15516 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.34□□□□□ -0.11
CLOCKO15516 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CLOCKO15516 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 AC055811.4-201ENST00000624039 1754 ntBASIC14.34□□□□□ -0.11
CLOCKO15516 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLOCKO15516 AC131212.3-201ENST00000624087 4219 ntBASIC14.33□□□□□ -0.11
CLOCKO15516 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLOCKO15516 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLOCKO15516 AC027612.1-201ENST00000445234 2395 ntBASIC14.33□□□□□ -0.11
CLOCKO15516 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLOCKO15516 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CLOCKO15516 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLOCKO15516 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.33□□□□□ -0.11
CLOCKO15516 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLOCKO15516 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CLOCKO15516 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLOCKO15516 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.33□□□□□ -0.12
CLOCKO15516 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLOCKO15516 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms