Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC23.23■■□□□ 1.31
CHD1O14646 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1O14646 LINC01101-201ENST00000622953 1884 ntBASIC23.23■■□□□ 1.31
CHD1O14646 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 GOLGA2P8-201ENST00000505201 779 ntBASIC23.22■■□□□ 1.31
CHD1O14646 AC093300.1-201ENST00000510368 1201 ntBASIC23.22■■□□□ 1.31
CHD1O14646 ISL1-203ENST00000511384 981 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC23.22■■□□□ 1.31
CHD1O14646 MBP-230ENST00000528160 584 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC23.22■■□□□ 1.31
CHD1O14646 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC23.22■■□□□ 1.31
CHD1O14646 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CHD1O14646 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC23.22■■□□□ 1.31
CHD1O14646 AC103563.1-201ENST00000429316 123 ntBASIC23.22■■□□□ 1.31
CHD1O14646 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC23.22■■□□□ 1.31
CHD1O14646 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1O14646 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC23.22■■□□□ 1.31
CHD1O14646 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC23.22■■□□□ 1.31
CHD1O14646 BATF-202ENST00000555504 361 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1O14646 AC120498.5-201ENST00000561757 299 ntBASIC23.22■■□□□ 1.31
CHD1O14646 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CHD1O14646 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CHD1O14646 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 STRN-202ENST00000379213 2254 ntTSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 AC133141.1-201ENST00000443015 339 ntBASIC23.21■■□□□ 1.31
CHD1O14646 VDAC1P11-201ENST00000458323 852 ntBASIC23.21■■□□□ 1.31
CHD1O14646 AC007679.1-201ENST00000458609 502 ntBASIC23.21■■□□□ 1.31
CHD1O14646 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC23.21■■□□□ 1.31
CHD1O14646 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1O14646 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CHD1O14646 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
CHD1O14646 AL662844.4-201ENST00000606367 2838 ntBASIC23.21■■□□□ 1.31
CHD1O14646 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1O14646 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1O14646 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
CHD1O14646 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.31
CHD1O14646 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC23.2■■□□□ 1.3
CHD1O14646 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC23.2■■□□□ 1.3
CHD1O14646 HNRNPA1P10-201ENST00000444945 962 ntBASIC23.2■■□□□ 1.3
CHD1O14646 AC093700.1-201ENST00000503348 717 ntBASIC23.2■■□□□ 1.3
CHD1O14646 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC23.2■■□□□ 1.3
CHD1O14646 ABCC6P1-203ENST00000565566 1170 ntBASIC23.2■■□□□ 1.3
CHD1O14646 AC106782.5-201ENST00000616011 337 ntBASIC23.2■■□□□ 1.3
CHD1O14646 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1O14646 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CHD1O14646 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD1O14646 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1O14646 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1O14646 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD1O14646 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1O14646 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC23.19■■□□□ 1.3
CHD1O14646 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD1O14646 RN7SL684P-201ENST00000465665 294 ntBASIC23.19■■□□□ 1.3
CHD1O14646 AP000920.1-201ENST00000531824 344 ntBASIC23.19■■□□□ 1.3
CHD1O14646 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC23.19■■□□□ 1.3
CHD1O14646 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms