Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AL008707.1-201ENST00000422498 534 ntBASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AL162426.1-201ENST00000624141 743 ntBASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TBC1D3FA6NER0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 Z97180.1-201ENST00000445173 988 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AC104073.2-201ENST00000453737 312 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AL136295.7-201ENST00000619226 1200 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AC023090.2-201ENST00000625182 2110 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 TUBBP5-203ENST00000508529 1334 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 AC003102.2-201ENST00000589195 1469 ntBASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TBC1D3FA6NER0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TBC1D3FA6NER0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.87□□□□□ -0.03
TBC1D3FA6NER0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TBC1D3FA6NER0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.87□□□□□ -0.03
TBC1D3FA6NER0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms