Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 AC099568.2-201ENST00000609194 695 ntBASIC15.28■□□□□ 0.04
CCDC78A2IDD5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 BX539320.1-201ENST00000623759 877 ntBASIC15.28■□□□□ 0.04
CCDC78A2IDD5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCDC78A2IDD5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.27■□□□□ 0.04
CCDC78A2IDD5 AC239800.4-201ENST00000603712 296 ntBASIC15.27■□□□□ 0.04
CCDC78A2IDD5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC78A2IDD5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 AC067750.1-201ENST00000608826 6545 ntBASIC15.27■□□□□ 0.03
CCDC78A2IDD5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC78A2IDD5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC023090.2-201ENST00000625182 2110 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC007191.1-201ENST00000623179 2995 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC087499.6-201ENST00000411576 835 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PIN1P1-201ENST00000412108 996 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 SOCS2P1-201ENST00000417727 557 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC093813.1-201ENST00000605066 256 ntBASIC15.26■□□□□ 0.03
CCDC78A2IDD5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC78A2IDD5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms