Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC079316.1-201ENST00000548397 411 ntBASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC025279.2-201ENST00000569730 653 ntBASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPDC1A2A3K4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 AP001267.2-201ENST00000532619 2086 ntBASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 YBX1P6-201ENST00000442962 1002 ntBASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 RNA5SP412-201ENST00000516234 123 ntBASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPDC1A2A3K4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 BRWD1P1-201ENST00000401091 371 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 KLF2P2-201ENST00000416807 1039 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 FAM197Y7-201ENST00000432892 766 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 AL355994.2-201ENST00000447882 704 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 DUX4L47-201ENST00000566374 394 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 MIR4538-201ENST00000581377 78 ntBASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPDC1A2A3K4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 AC015656.1-201ENST00000624209 3578 ntBASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTPDC1A2A3K4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms