Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 Z82170.1-201ENST00000625081 3192 ntBASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 CR383656.2-201ENST00000548656 2254 ntBASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV3S1A0A5B6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 SERBP1P3-201ENST00000459980 809 ntBASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 AC126335.2-201ENST00000623362 4637 ntBASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 AL157996.1-201ENST00000624684 2299 ntBASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV3S1A0A5B6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AL158070.2-201ENST00000623713 1621 ntBASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TCRBV3S1A0A5B6 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms