Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AP000437.1-201ENST00000624057 2085 ntBASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 KHSRPP1-201ENST00000427983 1768 ntBASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 LINC01568-207ENST00000641790 1380 ntBASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.38□□□□□ -0.59
TRAPPC1Q9Y5R8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 AC022400.8-201ENST00000623453 3599 ntBASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 DLX4-206ENST00000611342 1662 ntBASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 LIN28AP1-201ENST00000429574 405 ntBASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 KRT18P38-201ENST00000449496 1282 ntBASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 AC139887.3-201ENST00000568585 713 ntBASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.37□□□□□ -0.59
TRAPPC1Q9Y5R8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms