Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YIPF1Q9Y548 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 AC091046.1-201ENST00000331871 207 ntBASIC15.52■□□□□ 0.08
YIPF1Q9Y548 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.52■□□□□ 0.08
YIPF1Q9Y548 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 AC011270.2-201ENST00000624293 2550 ntBASIC15.52■□□□□ 0.07
YIPF1Q9Y548 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
YIPF1Q9Y548 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AL136172.1-201ENST00000598590 1394 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC091951.1-201ENST00000512854 2465 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC006335.1-201ENST00000445200 547 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC103988.2-201ENST00000561804 725 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 MIR3907-201ENST00000579424 151 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC079336.7-201ENST00000623428 1078 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 FER1L4-210ENST00000615531 5998 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 AC105917.1-201ENST00000506637 2539 ntBASIC15.51■□□□□ 0.07
YIPF1Q9Y548 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.51■□□□□ 0.07
YIPF1Q9Y548 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
YIPF1Q9Y548 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
YIPF1Q9Y548 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.5■□□□□ 0.07
YIPF1Q9Y548 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
YIPF1Q9Y548 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.5■□□□□ 0.07
YIPF1Q9Y548 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms