Protein–RNA interactions for Protein: Q9Y534

CSDC2, Cold shock domain-containing protein C2, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2Q9Y534 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ALG1L5P-201ENST00000482043 771 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 LINC01115-203ENST00000606068 577 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 MIR6080-201ENST00000617359 66 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 AC004461.2-201ENST00000629517 803 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 TRIM80P-201ENST00000455685 2848 ntBASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CSDC2Q9Y534 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AC117489.1-201ENST00000625169 3217 ntBASIC10.46□□□□□ -0.73
CSDC2Q9Y534 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 RN7SL618P-201ENST00000477850 296 ntBASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 TUBB3P1-201ENST00000405796 1332 ntBASIC10.46□□□□□ -0.73
CSDC2Q9Y534 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CSDC2Q9Y534 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CSDC2Q9Y534 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms