Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AC012508.2-201ENST00000567613 1472 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AC020910.6-201ENST00000623084 1459 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PMS2P4-201ENST00000412466 1052 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 RNA5SP416-201ENST00000516838 111 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 IGHV3-65-201ENST00000523210 341 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AC140113.2-201ENST00000604370 208 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 AL365181.3-201ENST00000605886 3222 ntBASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRCH1Q9Y2L9 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.33□□□□□ -0.12
LRCH1Q9Y2L9 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LRCH1Q9Y2L9 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms