Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 AC092135.3-201ENST00000624151 1846 ntBASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 AL136172.1-201ENST00000598590 1394 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 MRPL37P1-201ENST00000592451 1337 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 AP005482.1-201ENST00000563722 1273 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 MIR4259-201ENST00000584466 101 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 BX088702.1-201ENST00000610784 235 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 COX11-210ENST00000639671 696 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 NFIC-211ENST00000641145 8399 ntBASIC17.08■□□□□ 0.32
PCDHA4Q9UN74 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 AC007686.3-201ENST00000619017 3487 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 AC099336.1-201ENST00000417053 1171 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 CSF2RBP1-201ENST00000447905 391 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 ALG3P1-201ENST00000508806 1114 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 AC023310.1-201ENST00000554836 735 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 MIR4683-201ENST00000579659 81 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 MIR6805-201ENST00000615055 62 ntBASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHA4Q9UN74 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 MIR658-201ENST00000385210 100 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AL136309.1-201ENST00000403917 691 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 HLA-V-201ENST00000429037 534 ntBASIC17.06■□□□□ 0.32
PCDHA4Q9UN74 CNN2P10-201ENST00000443067 918 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms