Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VAPAQ9P0L0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 INE2-201ENST00000630399 1874 ntBASIC14.21□□□□□ -0.14
VAPAQ9P0L0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.21□□□□□ -0.14
VAPAQ9P0L0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FAM86LP-201ENST00000478302 853 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AC004449.1-201ENST00000564240 433 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL049840.4-201ENST00000602422 811 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AL662799.1-202ENST00000614205 422 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 CICP16-201ENST00000502609 2813 ntBASIC14.2□□□□□ -0.14
VAPAQ9P0L0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VAPAQ9P0L0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 KRT8P22-201ENST00000562317 1415 ntBASIC14.19□□□□□ -0.14
VAPAQ9P0L0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAPAQ9P0L0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms