Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RN7SL48P-201ENST00000579283 293 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 AC017083.2-201ENST00000608069 979 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AC079776.1-201ENST00000401540 1152 ntBASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AC234783.1-201ENST00000441761 496 ntBASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 ENPP7P14-201ENST00000621765 1040 ntBASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
KCMF1Q9P0J7 AC018529.2-202ENST00000611482 3087 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC016694.1-201ENST00000434179 700 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC245100.3-201ENST00000441281 285 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 CROCCP4-201ENST00000457096 498 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 FTH1P14-201ENST00000482930 551 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AL359881.2-201ENST00000602973 570 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 AL512343.1-201ENST00000605837 169 ntBASIC14.23□□□□□ -0.13
KCMF1Q9P0J7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms