Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCM2LQ9NUG4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 HIST3H2BA-201ENST00000436555 524 ntBASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 TMEM198B-204ENST00000484016 896 ntBASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AC022447.6-201ENST00000515522 438 ntBASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AC130686.1-201ENST00000622936 2466 ntBASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCM2LQ9NUG4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC022144.1-201ENST00000602255 1580 ntBASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 PPT1-213ENST00000641319 2388 ntBASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 AC015818.8-201ENST00000587907 1519 ntBASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms