Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AGAP12P-201ENST00000585227 2359 ntBASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ADGRE2-209ENST00000596991 2596 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDC42SE1Q9NRR8 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PLCG2-207ENST00000564138 8707 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AOC1-207ENST00000493429 3135 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 RNPC3-202ENST00000524631 2013 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AL023284.2-201ENST00000405850 579 ntBASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 BX842568.3-201ENST00000418104 571 ntBASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AC073210.2-201ENST00000430369 194 ntBASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AC103724.3-201ENST00000564481 992 ntBASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AL162412.1-201ENST00000567129 965 ntBASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDC42SE1Q9NRR8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 ATF4P4-201ENST00000393544 1930 ntBASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 CICP3-201ENST00000440782 2455 ntBASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 CICP2-201ENST00000420675 2328 ntBASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 KCND2-201ENST00000331113 5331 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 AC073476.3-201ENST00000563949 2507 ntBASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC7.46□□□□□ -1.21
CDC42SE1Q9NRR8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms