Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AC074044.1-201ENST00000609673 707 ntBASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ELL2P1-201ENST00000413990 1906 ntBASIC18.49■□□□□ 0.55
UPF2Q9HAU5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 KRT8P22-201ENST00000562317 1415 ntBASIC18.49■□□□□ 0.55
UPF2Q9HAU5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AC005252.3-201ENST00000623855 2258 ntBASIC18.48■□□□□ 0.55
UPF2Q9HAU5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AC004832.2-201ENST00000426397 482 ntBASIC18.48■□□□□ 0.55
UPF2Q9HAU5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 MIR6080-201ENST00000617359 66 ntBASIC18.48■□□□□ 0.55
UPF2Q9HAU5 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 AGGF1P1-201ENST00000509500 2073 ntBASIC18.48■□□□□ 0.55
UPF2Q9HAU5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.48■□□□□ 0.55
UPF2Q9HAU5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 SPDYE14P-201ENST00000442619 822 ntBASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 AC026150.2-201ENST00000564693 1156 ntBASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF2Q9HAU5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms